The Kagera Basin, which lies within the four countries of Burundi, Rwanda, Uganda and Tanzania, is characterized by low-production subsistence agriculture and widespread poverty. Severe land degradation in the area is linked to loss of soil fertility caused by population pressure and primitive farming methods. The basin countries rank among the world's poorest countries. Land cover depletion including deforestation is wide-spread with almost total absence of reforestation activities.

The 2017 African Great Lakes Conference, Entebbe, Uganda resolved to advance the African Great Lakes Information Platform (AGLI) (this platform) established by The Nature Conservancy. AGLI was created to promote research and collaboration and support decision-making to ensure the inter-generational sustainability of the lakes and their basins. AGLI will be hosted at the University of Nairobi and managed jointly with the African Center for Aquatic Research and Education. 

Members of this project will host an applied, collaborative workshop which creates lake committees on each of the African Great Lakes. Each lake committee will consist of relevant freshwater experts to harmonize and prioritize research, guide regional research efforts, and facilitate communications between partner countries to positively affect freshwater policy and management using regular in-person meetings, the African Great Lakes Inform, and other relevant means.

Lake Victoria Basin covers an area of 250,000 km² with the lake taking 68,000 km². The basin has a population of 35 - 40 million people, with rapidly growing secondary towns, which has resulted in unplanned, sponteneous and unsustainable growth, run-down and non-existent basic infrastructure and services and significant negative impacts on the environment and fragile ecosystem of the lake.

Musambwa Islands are some of the smallest islands located in Lake Victoria in the Rakai District. Despite their size, they support large populations of African breeding birds like the Grey Headed Gull, Greater Cormorant, Little Egret and the Long-tailed Cormorant. Due to their importance to birds of global significance, the islands have been recognized as an Important Bird Area. The islands are known to be the largest breeding site in Africa for Grey Headed Gulls.

Cage aquaculture is spreading rapidly on AGLs without lake-specific best management practices (BMPs) to ensure long-term socio-economic and environmental sustainability. PESCA project is developing a decision support tool (DST) and BMPs to guide development or improvement of policies and regulations to improve fish production and profitability from cage aquaculture with minimal impacts on the aquatic environment of the AGLs.

In an effort to address the escalating pollution of Lake Victoria, the GEF Small Grants Programme (GEF SGP) supported a project implemented by Environmental Women in Action for Development (EWAD) aimed at improving the ecosystems of Lake Victoria. This project restored degraded sand mining areas, promoted the use of energy efficient fish smoking kilns and introduced environmentally friendly Eco san toilet facilities in Kigungu, Entebbe Sub district.

Dansk Ornitologisk Forening (DOF) and BirdLife partners in the South (Nature Kenya, Nature Uganda and Bird Conservation Nepal (BCN)), are running a three-year project that began in 2015. The project places a strong emphasis on promoting equality of women and their access to programme benefits and participation, addressing inclusion of indigenous and other marginalised groups, networking and strengthened influence of local civil society groups_and advocacy within the national contexts of programme partner countries.